Enhancement/reduce verbosity

[MeyerBender]

Set the default logging level to WARNINGS instead of INFO to avoid printing walls of text when everything is working correctly.

Example usage:

import spatialdata_plot
from spatialdata.datasets import blobs

blob = blobs()

# this used to trigger printing of an info message
# now it just outputs the plot
blob.pl.render_shapes("blobs_circles", method='datashader').pl.show()

# to get the old, more verbose behavior
spatialdata_plot.set_verbosity(True)
blob.pl.render_shapes("blobs_circles", method='datashader').pl.show()

[codecov-commenter]

Codecov Report

❌ Patch coverage is 96.29630% with 1 line in your changes missing coverage. Please review.
✅ Project coverage is 83.97%. Comparing base (2b10a49) to head (8837374).
⚠️ Report is 7 commits behind head on main.

Files with missing lines	Patch %	Lines
src/spatialdata_plot/_logging.py	93.33%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #524      +/-   ##
==========================================
+ Coverage   83.75%   83.97%   +0.21%     
==========================================
  Files           8        9       +1     
  Lines        2555     2590      +35     
==========================================
+ Hits         2140     2175      +35     
  Misses        415      415              

Files with missing lines	Coverage Δ
src/spatialdata_plot/__init__.py	100.00% <100.00%> (ø)
src/spatialdata_plot/_settings.py	100.00% <100.00%> (ø)
src/spatialdata_plot/_logging.py	94.73% <93.33%> (+3.07%)	⬆️

... and 2 files with indirect coverage changes

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[timtreis]

Hey @MeyerBender

thanks for the PR! Agree that it's very noisy. I've pushed a minor refactor that replaces the bool-based set_verbosity(True/False) with a Verbosity IntEnum mirroring scanpy's convention (error/warning/info/debug).

It'd now be

import spatialdata_plot
from spatialdata.datasets import blobs

blob = blobs()

# this used to trigger printing of an info message
# now it just outputs the plot
blob.pl.render_shapes("blobs_circles", method='datashader').pl.show()

# to get the old, more verbose behavior
spatialdata_plot.set_verbosity("info")
blob.pl.render_shapes("blobs_circles", method='datashader').pl.show()

The default is still warning, preserving your original intent. Could you test if that is the UX you hoped for?

[MeyerBender]

Hi @timtreis, thanks a lot, LGTM!

[timtreis]

lgtm