v2.4.11

Add entries for Raman Imaging, STARmap, and 10x Flex

Full Changelog: v2.4.10...v2.4.11

v2.4.10

Fix orcid id and name on dois as well as add license info

Full Changelog: v2.4.9...v2.4.10

v2.4.9

Update POST /entities/file-system-rel-path endpoint with adding optional query parameter ?from-protected-space=True to work with new "public versions of protected datasets"

Full Changelog: v2.4.8...v2.4.9

v2.4.8

• Updates to publish endpoint:
  • Use APIs more in publish endpoint vs going straight to Neo4j
  • Auto-create a Collection attached to published Publications
  • Remove datacite_doi unit tests
• Rule chain update to snRNAseq (10x Genomics) [Salmon]

Full Changelog: v2.4.7...v2.4.8

v2.4.7

Add two attributes has_published_processed and has_qa_processed for tracking processed data (in Published or QA status) returned by GET /datasets/data-status endpoint.

Full Changelog: v2.4.6...v2.4.7

v2.4.6

• Docker image update to use the latest api-base-image:1.2.0 with Python 3.13
• Update to a special IVT release https://github.com/hubmapconsortium/ingest-validation-tools/releases/tag/v0.0.24-ingest-api-python3.13 for compatibility
• Dependency updates in requirements.txt to work with Python 3.13 build
• Remove Werkzeug from requirements.txt as it's included in Flask, separate from the Python 3.13 upgrade
• Update Github Actions CI Workflow to use Python 3.13 for dependency install check
• Clean up unneeded Unit tests

Full Changelog: v2.4.5...v2.4.6

v2.4.5

• Update Xenium rule chain
• Update requests and hubmap-commons versions
• Support Collections and EPICollections in allowable_edit_states permission lookup

Full Changelog: v2.4.4...v2.4.5

v2.4.4

• Fix publish of public Component dataset
• Fix bug related to extended ACLs
• Do not update metadata.tsv files when publishing a Component dataset

Full Changelog: v2.4.3...v2.4.4

v2.4.3

• Make a public copy of protected datasets at publication time with Slack notification
• Add new rule chain for 4i
• Update rule chain for CosMx Transcriptomics

Full Changelog: v2.4.2...v2.4.3

v2.4.2

• Rule chain updates for CosMx Transcriptomics
• Dataset publish indent fix so consortium level datasets are moved correctly

Full Changelog: v2.4.1...v2.4.2